1. Sun Z, Yakhnin AV, FitzGerald PC, Mclntosh CE, Kashlev M*. Nascent RNA sequencing identifies a widespread sigma70 dependent pausing regulated by Gre factors in bacteria. Nature Communications, 2021. 12: 906.
2. Franco KS#, Sun Z#, Chen Y, Cagliero C, Zuo Y, Zhou YN, Kashlev M, Jin DJ, Schneider TD*. Escherichia coli σ38 promoters use two UP elements instead of a −35 element: resolution of a paradox and discovery that σ38 transcribes ribosomal promoters. BioRxiv, 2020.
3. Sun Z, Cagliero C, Izard J, Chen Y, Zhou YN, Heinz WF, Schneider TD and Jin DJ*. Density of σ70 promoter-like sites in the intergenic regions dictates the redistribution of RNA polymerase during osmotic stress in Escherichia coli. Nucleic Acids Research, 2019. 47(8): 3970–3985.
4. Martin CM, Sun Z, Zhou YN and Jin DJ*. Extrachromosomal nucleolus-like compartmentalization by a plasmid-borne ribosomal RNA operon and its role in nucleoid compaction. Frontiers in Microbiology, 2018. 9: 1115.
5. Martin CM, Cagliero C, Sun Z, Chen D, and Jin DJ*. Imaging of transcription and replication in the bacterial chromosome with multicolor Three-Dimensional Superresolution Structured Illumination Microscopy. Methods in Molecular Biology, 2018. 1837: 117–129.
6. Li J#, Wang C#, Yang G, Sun Z, Guo H, Shao K, Gu Y, Jiang W* and Zhang P*. Molecular mechanism of environmental d-xylose perception by a XylFII-LytS complex in bacteria. PNAS, 2017. 114(31): 8235–8240.
7. Jin DJ*, Martin CM, Sun Z, Cagliero C and Zhou YN. Nucleolus-like compartmentalization of the transcription machinery in fast-growing bacterial cells. Critical Reviews in Biochemistry and Molecular Biology, 2016. 52(1): 96–106.
8. Sun Z, Chen Y, Yang C, Yang S, Gu Y* and Jiang W*. A novel three-component system-based regulatory model for d-xylose sensing and transport in Clostridium beijerinckii. Molecular Microbiology, 2015. 95(4): 576–589.
9. Gu Y#, Ding Y#, Ren C, Sun Z, Rodionov DA, Zhang W, Yang S, Yang C* and Jiang W*. Reconstruction of xylose utilization pathway and regulons in Firmicutes. BMC Genomics, 2011. 11: 255.
专利：
顾阳，肖晗，姜卫红，宁媛媛，李治林，蒋宇，孙喆，杨晟。一种提高丙酮丁醇梭菌在混合糖发酵中糖利用率的方法。中国，ZL201210163123.8。
